Paper & Citations

If you are using SnpEff or SnpSift, please cite our work.

Citing SnpEff

You can find the paper here.

In order to cite SnpSift, please use the following reference:

Quote

"A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3.", Cingolani P, Platts A, Wang le L, Coon M, Nguyen T, Wang L, Land SJ, Lu X, Ruden DM. Fly (Austin). 2012 Apr-Jun;6(2):80-92. PMID: 22728672

BibTex entry:

@article{cingolani2012program,
title={A program for annotating and predicting the effects of single nucleotide polymorphisms, SnpEff: SNPs in the genome of Drosophila melanogaster strain w1118; iso-2; iso-3},
author={Cingolani, P. and Platts, A. and Coon, M. and Nguyen, T. and Wang, L. and Land, S.J. and Lu, X. and Ruden, D.M.},
journal={Fly},
volume={6},
number={2},
pages={80-92},
year={2012}
}

Citing SnpSift

You can find the paper here.

In order to cite SnpSift, please use the following reference:

Quote

"Using Drosophila melanogaster as a model for genotoxic chemical mutational studies with a new program, SnpSift", Cingolani, P., et. al., Frontiers in Genetics, 3, 2012.

BibTex entry:

@article{cingolani2012using,
title={Using Drosophila melanogaster as a model for genotoxic chemical mutational studies with a new program, SnpSift},
author={Cingolani, P. and Patel, V.M. and Coon, M. and Nguyen, T. and Land, S.J. and Ruden, D.M. and Lu, X.},
journal={Frontiers in Genetics},
volume={3},
year={2012},
publisher={Frontiers Media SA}
}